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ABOUT THIS RECORD
ID:
MNEST005281
species:
Sus scrofa
miRNA family:
mir-29
source:
miRNEST
Taxonomy by NCBI:
Sus scrofa
Sus
Suidae
Suina
Cetartiodactyla
Laurasiatheria
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCACCATTTGAAATCAGT
miRNA*
TGGTTTCACATGGGGGCTTAGA
mismatches:
2
bulges:
2
View larger
pre-miRNA
GAGACCCTCTTCTTCTGGAAGC
TGGTTTCACATGGGGGCTTAGA
TTTTTCCATCTTTGTATC
TAGCACCATTTGAAATCAGT
GTTTTAGGAGTAAGAATT
G
dot-bracket secondary structure
.......(((((((((((((((
((((((((.((((..(((.(((
(..............)))
)))).)))).))))))))))
.))))))))).))))...
.
SIMILARITIES
miRBase
eca-mir-29b-2
:
3e-38
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-29: 7e-27
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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