ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: miR-137a
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGGGTATTCTTGGGTGGATA miRNA* TTGCTTAAGAATACGCGTAG mismatches: 1 bulges: 1 |
pre-miRNA
CAGCAGCTTGGTCCTCTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGATTACGTTGTTATTGCTTAAGAATACGCGTAGTCGAGGAGAG
TACCAGCGGCAGGCGGGC
dot-bracket secondary structure
..((.(((((..((.(((((((((((((((.(((.(((((((((((((.((((((((.....)).))))))))))))))))))).))).)))))))))))
)..))).)))))))..))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGCAGCTTGGTCCTCTGACTCTCTTCGGTGACGGGTATTCTTGGGTGGATAATACGGATTACGTTGTTATTGCTTAAGAATACGCGTAGTCGAGGAGAG
TACCAGCGGCAGGCGGGC
dot-bracket secondary structure
..((.(((((..((.(((((((((((((((.(((.(((((((((((((.((((((((.....)).))))))))))))))))))).))).)))))))))))
)..))).)))))))..))
SIMILARITIES| miRBase mml-mir-137: 4e-53 PMRD no hits microPC no hits | UniProt no hits RFAM mir-137: 7e-46 | most similar mature miRNAs |
Identical with: mdo-mir-137 from miRBase (MNEST027385) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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