ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: mir-210
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTGTGCGTGTGACAGCGGCT miRNA* CCACTGCCCACCGCACACTGC mismatches: 3 bulges: 2 |
pre-miRNA
CGGTCCCTCCAGGCGCAGGGCAGCCACTGCCCACCGCACACTGCGCTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGC
dot-bracket secondary structure
.......((((((.(((((.(((((.(((..(((((((((.((..(((...)))...)).)))))).))).))).))))).))))).))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CGGTCCCTCCAGGCGCAGGGCAGCCACTGCCCACCGCACACTGCGCTGCTCCGGACCCACTGTGCGTGTGACAGCGGCTGATCTGTCCCTGGGCAGCGC
dot-bracket secondary structure
.......((((((.(((((.(((((.(((..(((((((((.((..(((...)))...)).)))))).))).))).))))).))))).))))))......
SIMILARITIES| miRBase bta-mir-210: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-210: 8e-39 | most similar mature miRNAs |
Identical with: ssc-mir-210 from miRBase (MNEST034038) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
