ABOUT THIS RECORD

ID: MNEST005317
species: Sus scrofa
miRNA family: miR-122b
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
AGATCTTCCTTAGCAGAGCTGTGGAGTGTGACAATGGTGTTTGTGTCCAAACTATCAAACGCCATTATCACACTAAATAGCTACTGTTAGGCAATCC

dot-bracket secondary structure
.....((.((((((((((((((..(((((((.(((((((((((.((....))...))))))))))).)))))))..)))))).)))))))).))...


SIMILARITIES

miRBase bta-mir-122: 5e-43 PMRD no hits microPC no hits

UniProt no hits RFAM mir-122: 7e-24

most similar mature miRNAs

Identical with: eca-mir-122 from miRBase (MNEST027006)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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