ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: mir-423
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGGGGCAGAGAGCGAGACTTT miRNA* AGCTCGGTCTGAGGCCCCTCAGT mismatches: 3 bulges: 2 |
pre-miRNA
GAAATAAAGAAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCG
dot-bracket secondary structure
.......((.((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))).))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAAATAAAGAAAGTTAGGCTGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTACCCCG
dot-bracket secondary structure
.......((.((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))).))......
SIMILARITIES| miRBase mmu-mir-423: 5e-46 PMRD no hits microPC no hits | UniProt no hits RFAM mir-423: 1e-37 | most similar mature miRNAs |
Identical with: hsa-mir-3184 from miRBase (MNEST029349) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
