ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: miR-3064
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCACACTGCAACACCTTAC miRNA* TCTGGCTGTTGTGGTGTGCAAA mismatches: 3 bulges: 2 |
pre-miRNA
TTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACTCCGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTG
AAA
dot-bracket secondary structure
...((....(((((((.((((....((.(((((((((((((((((....((.....))..))))).))))))))))))))...)))).)))))))....)
)..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACTCCGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTG
AAA
dot-bracket secondary structure
...((....(((((((.((((....((.(((((((((((((((((....((.....))..))))).))))))))))))))...)))).)))))))....)
)..
SIMILARITIES| miRBase hsa-mir-3064: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
