ABOUT THIS RECORDspecies: Sus scrofa
miRNA family: miR-4185
source: miRNEST
Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTATTCATACTGTCAGGGCT miRNA* CCCTGTTTGGAATGAAATGTA mismatches: 3 bulges: 2 |
pre-miRNA
GTTCCATATTTGCCCTGTTTGGAATGAAATGTACCAAGGTCGGAGGCTCAGATAAAGCCAAAGCTAAAATGGCTTGTTTGGCTGGGATTGTATTCATACT
GTCAGGGCTGTGCTCAAT
dot-bracket secondary structure
......(((..((((((..(((.((((((((..((..(((((((((((.......)))).(((((.....))))).))))))).))..))).))))).))
).)))))).)))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTTCCATATTTGCCCTGTTTGGAATGAAATGTACCAAGGTCGGAGGCTCAGATAAAGCCAAAGCTAAAATGGCTTGTTTGGCTGGGATTGTATTCATACT
GTCAGGGCTGTGCTCAAT
dot-bracket secondary structure
......(((..((((((..(((.((((((((..((..(((((((((((.......)))).(((((.....))))).))))))).))..))).))))).))
).)))))).)))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q5R8E5|CLD10_PONAB: 0.00000000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
