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ABOUT THIS RECORD

ID: MNEST005327
species: Sus scrofa
miRNA family: mir-648
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTGTGCAGGGCACTGGGAG

miRNA*
GGCCCAGGCTTTTCATGCCGCG

mismatches: 3
bulges: 1

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pre-miRNA
TTTTTCTCTCTGATGGGGAGCAGGCCCAGGCTTTTCATGCCGCGACTAAAGGCCGCTGAGCCGCTGGAATAGCAGCAGGGCTGGAGGTGTGCAGGGCACT
GGGAG
CTAACGGAAGGAAGGGTCT


dot-bracket secondary structure
.((((((.((((......(((...((((((((((.((((((.........((((.(((....((((...))))..)))))))...)))))).))))).))
))).)
))..)))).))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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