ABOUT THIS RECORDspecies: Bos taurus
miRNA family: miR-1343
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTTGGGGCCCGCACTCTCG miRNA* GGGGAGCGGACCCCCGGGCGG mismatches: 5 bulges: 0 |
pre-miRNA
CGGTGCTGGGGAGCGGACCCCCGGGCGGGCCACCCCTCCGGCCTCTCTTGGGGCCCGCACTCTCGCTCCGGGCC
dot-bracket secondary structure
(((.((.((((.((((.((((.(((.(((((........))))).))).)))).)))).)))).)).)))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGGTGCTGGGGAGCGGACCCCCGGGCGGGCCACCCCTCCGGCCTCTCTTGGGGCCCGCACTCTCGCTCCGGGCC
dot-bracket secondary structure
(((.((.((((.((((.((((.(((.(((((........))))).))).)))).)))).)))).)).)))....
SIMILARITIES| miRBase bta-mir-1343: 2e-17 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
