ABOUT THIS RECORDspecies: Bos taurus
miRNA family: miR-145
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGATTCCTGGAAATACTGTTC miRNA* TCCAGTTTTCCCAGGAATCCCT mismatches: 3 bulges: 1 |
pre-miRNA
CTCTCTCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTAGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGTTTAACA
dot-bracket secondary structure
.......(((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).)))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCTCTCACCTTGTCCTCACGGTCCAGTTTTCCCAGGAATCCCTTAGATGCTAAGATGGGGATTCCTGGAAATACTGTTCTTGAGGTCATGGTTTAACA
dot-bracket secondary structure
.......(((.((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).)))).)).))))).)).)))......
SIMILARITIES| miRBase ggo-mir-145: 8e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-145: 8e-39 | most similar mature miRNAs |
Identical with: cfa-mir-145 from miRBase (MNEST026719) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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