ABOUT THIS RECORDspecies: Bos taurus
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAGGTAGTAGGTTGCATAGT miRNA* TATACGACCTGCTGCCTTTC mismatches: 1 bulges: 1 |
pre-miRNA
AAGAAAAAAATGGGTTCCTAAGAAGAGGTAGTAGGTTGCATAGTTTTCGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTT
AGGGCCTTATTATACCAC
dot-bracket secondary structure
........((((((.(((((((((.(((((((((((((.((((((.((((((((.....)))))).......)).)))))).))))))))))))))))))
)))).)))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAGAAAAAAATGGGTTCCTAAGAAGAGGTAGTAGGTTGCATAGTTTTCGGGCAGGGATTTTGCCCACAAGGAGGTAACTATACGACCTGCTGCCTTTCTT
AGGGCCTTATTATACCAC
dot-bracket secondary structure
........((((((.(((((((((.(((((((((((((.((((((.((((((((.....)))))).......)).)))))).))))))))))))))))))
)))).)))))).......
SIMILARITIES| miRBase mmu-let-7d: 6e-43 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 9e-30 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
