miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005425
species: Bos taurus
miRNA family: miR-9
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAAGCTAGATAACCGAAAGT

miRNA*
CTTTGGTTATCTAGCTGTATG

mismatches: 2
bulges: 0

View larger
pre-miRNA
TGAGGGAAGCGAGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTTCAAGGG

dot-bracket secondary structure
.....((((.(((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).))))))))).....


SIMILARITIES
miRBase rno-mir-3597-2: 8e-48

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-9: 2e-17
most similar mature miRNAs

Identical with: mml-mir-9-2 from miRBase (MNEST027646)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;