ABOUT THIS RECORDspecies: Bos taurus
miRNA family: mir-9
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTTGGTTATCTAGCTGTAT miRNA* AAAGCTAGATAACCGAAAGTA mismatches: 2 bulges: 0 |
pre-miRNA
GTGAGGGAAGCGAGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTTCAAGGGC
dot-bracket secondary structure
......((((.(((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).)))))))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGAGGGAAGCGAGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTCTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTTCAAGGGC
dot-bracket secondary structure
......((((.(((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).)))))))))......
SIMILARITIES| miRBase rno-mir-3597-2: 2e-48 PMRD no hits microPC no hits | UniProt no hits RFAM mir-9: 2e-17 | most similar mature miRNAs |
Identical with: mml-mir-9-2 from miRBase (MNEST027646) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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