ABOUT THIS RECORDspecies: Bos taurus
miRNA family: miR-2340
source: miRNEST
Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGACTTCCCTGGTGGTCCAGT miRNA* GTGACCTTGGGCGAGTCCCT mismatches: 4 bulges: 1 |
pre-miRNA
GCTGTTTTCCACGTGACCTTGGGCGAGTCCCTGTCTTCTGCCCAAGCCTCGGGTTCCTCGTTAGCGAGACGCACACAGCGATGGACACGTTCGGGGGTCT
CTGAGATACAGTGTACGTAGAGCACTTAACAAGGTGCCTGGTGGGACTTCCCTGGTGGTCCAGTGGTTAAGAC
dot-bracket secondary structure
....((..((((..((((.((((.(((((((...((...((((.......))))..((((....)))).(((.....)))(((.((((.((((((....)
))))).....)))).)))((.((((((....)))))))))).))))))).))))..))))..))))..))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCTGTTTTCCACGTGACCTTGGGCGAGTCCCTGTCTTCTGCCCAAGCCTCGGGTTCCTCGTTAGCGAGACGCACACAGCGATGGACACGTTCGGGGGTCT
CTGAGATACAGTGTACGTAGAGCACTTAACAAGGTGCCTGGTGGGACTTCCCTGGTGGTCCAGTGGTTAAGAC
dot-bracket secondary structure
....((..((((..((((.((((.(((((((...((...((((.......))))..((((....)))).(((.....)))(((.((((.((((((....)
))))).....)))).)))((.((((((....)))))))))).))))))).))))..))))..))))..))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.00001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
