ABOUT THIS RECORD

ID: MNEST005483
species: Danio rerio
miRNA family: mir-1268
source: miRNEST

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GCGAGCTGTCCCGCGTGGCGGTGGGCGTGGTGGTGGGCCGTCTGCAGGGGGCGCTGCCCGGGGCGCAGGTGCAGCTGGAGCAGCCGCTGCACTCGCTCGC
TCTCAGCACGGATCTGCCGCTCCGACAGGTGTGCCACGACCAGCATC

dot-bracket secondary structure
....((((.....(((((((.((..((.(((((((((((((..((.(((((((..(((...)))((.((((((((.((.....)))))))))).)).)))
)))).)))))).))))))))).)).))....)))))))..))))...


SIMILARITIES

miRBase no hits PMRD no hits microPC no hits

UniProt sp|Q9ESJ4|SPN90_MOUSE: 0.000005 RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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