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ABOUT THIS RECORD
ID:
MNEST005483
species:
Danio rerio
miRNA family:
mir-1268
source:
miRNEST
Taxonomy by NCBI:
Danio rerio
Danio
Cyprinidae
Cyprinoidea
Cypriniformes
Cypriniphysi
Otophysi
Ostariophysi
Otocephala
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGGCGTGGTGGTGGGCCGTC
miRNA*
CGGATCTGCCGCTCCGACAGG
mismatches:
3
bulges:
2
View larger
pre-miRNA
GCGAGCTGTCCCGCGTGGCGG
TGGGCGTGGTGGTGGGCCGTC
TGCAGGGGGCGCTGCCCGGGGCGCAGGTGCAGCTGGAGCAGCCGCTGCACTCGCTCGC
TCTCAGCA
CGGATCTGCCGCTCCGACAGG
TGTGCCACGACCAGCATC
dot-bracket secondary structure
....((((.....(((((((.
((..((.(((((((((((((.
.((.(((((((..(((...)))((.((((((((.((.....)))))))))).)).)))
)))).)))
))).))))))))).)).))..
..)))))))..))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9ESJ4|SPN90_MOUSE: 0.000005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record