ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-122
source: miRNEST
SEQUENCE & STRUCTURE| miRNA AACACCATTGTCACACTCCA miRNA* TAGTGTGATAATGGCGTTTG mismatches: 4 bulges: 0 |
pre-miRNA
TGCAGTAGCTCATTAGTGTGATAATGGCGTTTGATAGCTCTGACACAAACACCATTGTCACACTCCATAGCTCCAGC
dot-bracket secondary structure
......((((....(((((((((((((.(((((............))))).)))))))))))))....)))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCAGTAGCTCATTAGTGTGATAATGGCGTTTGATAGCTCTGACACAAACACCATTGTCACACTCCATAGCTCCAGC
dot-bracket secondary structure
......((((....(((((((((((((.(((((............))))).)))))))))))))....)))).....
SIMILARITIES| miRBase xtr-mir-122: 1e-33 PMRD no hits microPC no hits | UniProt no hits RFAM mir-122: 0.00000000000007 | most similar mature miRNAs |
Identical with: xtr-mir-122 from miRBase (MNEST025762) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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