ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-1
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TGGAATGTAAAGAAGTATGT miRNA* ATACTTCTTTATGTACCCATA mismatches: 1 bulges: 1 |
pre-miRNA
TTATATCTACCTGTTTGGAGNACATACTTCTTTATGTACCCATATGAACATACNATGCTATGGAATGTAAAGAAGTATGTATTTTTATCANGTACTGAAC
dot-bracket secondary structure
.......(((.((..(((((.((((((((((((((((..(((((..............))))).))))))))))))))))..))))).)).)))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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TTATATCTACCTGTTTGGAGNACATACTTCTTTATGTACCCATATGAACATACNATGCTATGGAATGTAAAGAAGTATGTATTTTTATCANGTACTGAAC
dot-bracket secondary structure
.......(((.((..(((((.((((((((((((((((..(((((..............))))).))))))))))))))))..))))).)).)))......
SIMILARITIES| miRBase xtr-mir-1a-1: 1e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-1: 2e-33 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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