ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-4145
source: miRNEST
SEQUENCE & STRUCTURE| miRNA AATGGAACTGTTGATGTGGAC miRNA* CCACATGCATTGTTCTATTTA mismatches: 4 bulges: 2 |
pre-miRNA
CTGGACCATCAAATGGAACTGTTGATGTGGACTTTTTAAAATACGGTTATTTAGCAATCCTTAACAAACAATATACGAGAGAAAAAAACCACATGCATTG
TTCTATTTACCGCTATA
dot-bracket secondary structure
..........(((((((((...((((((((..(((((......((..((((..................))))..))....)))))..)))))).))..)
)))))))).........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTGGACCATCAAATGGAACTGTTGATGTGGACTTTTTAAAATACGGTTATTTAGCAATCCTTAACAAACAATATACGAGAGAAAAAAACCACATGCATTG
TTCTATTTACCGCTATA
dot-bracket secondary structure
..........(((((((((...((((((((..(((((......((..((((..................))))..))....)))))..)))))).))..)
)))))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
