ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-10
source: miRNEST
SEQUENCE & STRUCTURE| miRNA ACCCTGTAGATCCGAATTTGT miRNA* AAATTCGTGTCTGGGGGGATA mismatches: 3 bulges: 0 |
pre-miRNA
TTTGCCTGTCCTCTGTATGTACCCTGTAGATCCGAATTTGTGTGAGCGCAATCATATCACAAATTCGTGTCTGGGGGGATATGCAGTTGACACAAACG
dot-bracket secondary structure
((((..((((..((((((((.((((.(((((.(((((((((((((......)))...)))))))))).))))).))))))))))))..))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTGCCTGTCCTCTGTATGTACCCTGTAGATCCGAATTTGTGTGAGCGCAATCATATCACAAATTCGTGTCTGGGGGGATATGCAGTTGACACAAACG
dot-bracket secondary structure
((((..((((..((((((((.((((.(((((.(((((((((((((......)))...)))))))))).))))).))))))))))))..))))))))..
SIMILARITIES| miRBase xtr-mir-10a: 8e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 8e-36 | most similar mature miRNAs |
Identical with: xtr-mir-10a from miRBase (MNEST025694) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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