ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-142
source: miRNEST
SEQUENCE & STRUCTURE| miRNA AGTGTTTCCTACTTTATGGAT miRNA* CCATAAAGTAGAAAGCACTAC mismatches: 2 bulges: 0 |
pre-miRNA
AGTGCAGCCACCCATAAAGTAGAAAGCACTACTAGACAGGACTGAACGCTGTAGTGTTTCCTACTTTATGGATGAGTGTAC
dot-bracket secondary structure
.(((((..((.(((((((((((.(((((((((.((.............))))))))))).))))))))))).))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTGCAGCCACCCATAAAGTAGAAAGCACTACTAGACAGGACTGAACGCTGTAGTGTTTCCTACTTTATGGATGAGTGTAC
dot-bracket secondary structure
.(((((..((.(((((((((((.(((((((((.((.............))))))))))).))))))))))).))..)))))
SIMILARITIES| miRBase xla-mir-142: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-142: 3e-25 | most similar mature miRNAs |
Identical with: xtr-mir-142-1 from miRBase (MNEST025789) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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