ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-142
source: miRNEST
SEQUENCE & STRUCTURE| miRNA CATAAAGTAGAAAGCACTACT miRNA* TAGTGTTTCCTACTTTATGGA mismatches: 2 bulges: 0 |
pre-miRNA
CAGTGCAGCCACCCATAAAGTAGAAAGCACTACTAGACAGGACTGAACGCTGTAGTGTTTCCTACTTTATGGATGAGTGTACT
dot-bracket secondary structure
.((((((..((.(((((((((((.(((((((((.((.............))))))))))).))))))))))).))..))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
CAGTGCAGCCACCCATAAAGTAGAAAGCACTACTAGACAGGACTGAACGCTGTAGTGTTTCCTACTTTATGGATGAGTGTACT
dot-bracket secondary structure
.((((((..((.(((((((((((.(((((((((.((.............))))))))))).))))))))))).))..))))))
SIMILARITIES| miRBase xla-mir-142: 6e-42 PMRD no hits microPC no hits | UniProt no hits RFAM mir-142: 2e-26 | most similar mature miRNAs |
Identical with: xtr-mir-142-1 from miRBase (MNEST025789) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
