ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-133
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TTGGTCCCCTTCAACCAGCTA miRNA* GCTGGTCAAACGGAACCAAGT mismatches: 4 bulges: 0 |
pre-miRNA
CCTGGGCCTTACAGGCTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTACTGAGCCTCA
AC
dot-bracket secondary structure
...((((....((((((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))).))).))))..
..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCTGGGCCTTACAGGCTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTACTGAGCCTCA
AC
dot-bracket secondary structure
...((((....((((((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))).))).))))..
..
SIMILARITIES| miRBase xla-mir-133b: 5e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 3e-26 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
