ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-133b
source: miRNEST
SEQUENCE & STRUCTURE| miRNA GCTGGTCAAACGGAACCAAGT miRNA* TTGGTCCCCTTCAACCAGCTA mismatches: 5 bulges: 0 |
pre-miRNA
TCCTGGGCCTTACAGGCTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTACTGAGCCTC
AACA
dot-bracket secondary structure
....((((....((((((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))).))).)))).
....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCTGGGCCTTACAGGCTGCTATGGCTGGTCAAACGGAACCAAGTCCGTCTTCCTTAGAGGTTTGGTCCCCTTCAACCAGCTATTGCAGTACTGAGCCTC
AACA
dot-bracket secondary structure
....((((....((((((((.(((((((((..((.((.((((((.((.(((.....))))))))))).)).))..))))))))).))))).))).)))).
....
SIMILARITIES| miRBase xla-mir-133b: 5e-37 PMRD no hits microPC no hits | UniProt no hits RFAM mir-133: 3e-26 | most similar mature miRNAs |
Identical with: xtr-mir-133b from miRBase (MNEST025777) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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