ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-125b
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TCACAAGTTAGGGTCTCAGGGA miRNA* CCAAGAGCCTAACTTGTGATT mismatches: 2 bulges: 1 |
pre-miRNA
CTCCGCCTAGGTCCCAAGAGCCTAACTTGTGATTGTTGCTAAAAAATCCTCACAAGTTAGGGTCTCAGGGACTAGGAAAAG
dot-bracket secondary structure
.....(((((.((((.(((.((((((((((((..(((.......)))..)))))))))))).)))..))))))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCCGCCTAGGTCCCAAGAGCCTAACTTGTGATTGTTGCTAAAAAATCCTCACAAGTTAGGGTCTCAGGGACTAGGAAAAG
dot-bracket secondary structure
.....(((((.((((.(((.((((((((((((..(((.......)))..)))))))))))).)))..))))))))).....
SIMILARITIES| miRBase xtr-mir-125b-2: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM lin-4: 1e-24 | most similar mature miRNAs |
Identical with: xtr-mir-125b-2 from miRBase (MNEST025766) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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