ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-9
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TCTTTGGTTATCTAGCTGTAT miRNA* AAAGCTAGATAACCGAAAGTA mismatches: 2 bulges: 0 |
pre-miRNA
TCAGGATCAGTGTGTGGGAAGTGGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTTTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTT
CCAGATCATCACATGGC
dot-bracket secondary structure
.........(((((..(((((.((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).)))).)))
)).......)))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCAGGATCAGTGTGTGGGAAGTGGTTGTTATCTTTGGTTATCTAGCTGTATGAGTGTATTGGTTTTCATAAAGCTAGATAACCGAAAGTAAAAACTCCTT
CCAGATCATCACATGGC
dot-bracket secondary structure
.........(((((..(((((.((((.((((.(((((((((((((((.((((((..........)))))).))))))))))))))).)))).)))).)))
)).......)))))...
SIMILARITIES| miRBase xtr-mir-9a-2: 6e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-9: 0.000000000000007 | most similar mature miRNAs |
Identical with: xtr-mir-9a-2 from miRBase (MNEST025692) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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