ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-27b
source: miRNEST
SEQUENCE & STRUCTURE| miRNA AGAGCTTAGCTGATTGGTGAA miRNA* CACAGTGGCTAAGTTCTGC mismatches: 2 bulges: 2 |
pre-miRNA
CGCTGACCTTTCTACCAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGATTCCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAGGG
CGAGGG
dot-bracket secondary structure
(((...(((((((....((((((((((((((((((....((((((((.((.........)).))))))))..))))))))))))))))))..))))))))
))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGCTGACCTTTCTACCAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGATTCCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAGGG
CGAGGG
dot-bracket secondary structure
(((...(((((((....((((((((((((((((((....((((((((.((.........)).))))))))..))))))))))))))))))..))))))))
))....
SIMILARITIES| miRBase xtr-mir-27b: 1e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 2e-30 | most similar mature miRNAs |
Identical with: xtr-mir-27b from miRBase (MNEST025724) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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