ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-27
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TTCACAGTGGCTAAGTTCTGC miRNA* AGAGCTTAGCTGATTGGTGAACA mismatches: 2 bulges: 2 |
pre-miRNA
GCTGACCTTTCTACCAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGATTCCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAGGGC
GAGG
dot-bracket secondary structure
.....(((((((....((((((((((((((((((....((((((((.((.........)).))))))))..))))))))))))))))))..)))))))..
....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
deep sequencing data evidence
GCTGACCTTTCTACCAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGATTCCCTCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAGGGC
GAGG
dot-bracket secondary structure
.....(((((((....((((((((((((((((((....((((((((.((.........)).))))))))..))))))))))))))))))..)))))))..
....
SIMILARITIES| miRBase xtr-mir-27b: 1e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-27: 2e-30 | most similar mature miRNAs |
Identical with: xtr-mir-27b from miRBase (MNEST025724) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
deep sequencing data evidence
