ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-135
source: miRNEST
SEQUENCE & STRUCTURE| miRNA ATGTAGGGATGGAAGCCATGA miRNA* ATGGCTTTTTATTCCTATGTGA mismatches: 0 bulges: 1 |
pre-miRNA
GATAAATTCACTGTGGTGTTTTATGGCTTTTTATTCCTATGTGATAGTAATAATGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAAAAGTCA
dot-bracket secondary structure
(((...(((((....((((((((((((((((.((((((((((((.............))))))))))))))))))))))))))))...)))))..))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATAAATTCACTGTGGTGTTTTATGGCTTTTTATTCCTATGTGATAGTAATAATGTCTCATGTAGGGATGGAAGCCATGAAATACATTGTGAAAAGTCA
dot-bracket secondary structure
(((...(((((....((((((((((((((((.((((((((((((.............))))))))))))))))))))))))))))...)))))..))).
SIMILARITIES| miRBase xtr-mir-135-1: 2e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-135: 1e-37 | most similar mature miRNAs |
Identical with: xtr-mir-135-1 from miRBase (MNEST025780) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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