ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: miR-669n
source: miRNEST
SEQUENCE & STRUCTURE| miRNA GTTTGTGTGTGTATGTGTGTG miRNA* CCATGTATCAGCCAAGCCC mismatches: 3 bulges: 2 |
pre-miRNA
TTAACGCAGGTGACCATGTATCAGCCAAGCCCTTAATCATTGCAGTCTCTGGTGTTGTGTTATTTTGTTTTATTTTGCCATTGGGTTTGTGTGTGTATGT
GTGTGTGTGTGTGTG
dot-bracket secondary structure
...(((((.(((..(((((((..(((((((((.................(((((..(((.(.....)...)))..)))))..))))))).))..))))))
)..))).)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTAACGCAGGTGACCATGTATCAGCCAAGCCCTTAATCATTGCAGTCTCTGGTGTTGTGTTATTTTGTTTTATTTTGCCATTGGGTTTGTGTGTGTATGT
GTGTGTGTGTGTGTG
dot-bracket secondary structure
...(((((.(((..(((((((..(((((((((.................(((((..(((.(.....)...)))..)))))..))))))).))..))))))
)..))).)))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.0004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
