ABOUT THIS RECORDspecies: Xenopus tropicalis
miRNA family: mir-181
source: miRNEST
SEQUENCE & STRUCTURE| miRNA AACATTCAACGCTGTCGGTGA miRNA* ATCGGCCGTTGACTGTACC mismatches: 3 bulges: 2 |
pre-miRNA
CACTGGAGCCCCCAACTTGAGGGCTTCAGAGAACATTCAACGCTGTCGGTGAGTTTGAGAAAGTGTAAAAATATAAACCATCGGCCGTTGACTGTACCCT
GAGGCTTTTCACAAAAATCCAATCTC
dot-bracket secondary structure
..(((((((((.((...)).)))))))))...(((.((((((..(((((((.(((((................)))))))))))))))))).))).....
..((.((((....)))).))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACTGGAGCCCCCAACTTGAGGGCTTCAGAGAACATTCAACGCTGTCGGTGAGTTTGAGAAAGTGTAAAAATATAAACCATCGGCCGTTGACTGTACCCT
GAGGCTTTTCACAAAAATCCAATCTC
dot-bracket secondary structure
..(((((((((.((...)).)))))))))...(((.((((((..(((((((.(((((................)))))))))))))))))).))).....
..((.((((....)))).))......
SIMILARITIES| miRBase xtr-mir-181a-2: 7e-49 PMRD no hits microPC no hits | UniProt no hits RFAM mir-181: 0.00000000003 | most similar mature miRNAs |
Identical with: xtr-mir-181a-2 from miRBase (MNEST025804) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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