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ABOUT THIS RECORD
ID:
MNEST005588
species:
Ciona intestinalis
miRNA family:
miR-4103
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGCTGCGGGTCCGCGGCTAA
miRNA*
AGCCGTAGAGCTGTACGAAA
mismatches:
5
bulges:
1
View larger
pre-miRNA
TCCCTCGCGAG
GCGCTGCGGGTCCGCGGCTAA
AGTCAGCCACCTTCCCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCG
AGCCGTAGA
GCTGTACGAAA
CTCGAAGG
dot-bracket secondary structure
..(((..((((
.((.(((((.((.((((((..
.....(((((......(((((((((........))))...)).)))......))).)).
)))))).))
.)))))))...
)))).)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Intron_gpI: 0.00000000003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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