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ABOUT THIS RECORD
ID:
MNEST005592
species:
Ciona intestinalis
miRNA family:
miR-4186
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAGATGAGACAAGAGTGAGT
miRNA*
TCACTCCCGTCTCATCTAACA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGAGTGAGTGTTACAAGTACCAAGCTGGGCTTTATATAACAC
TCACTCCCGTCTCATCTAACA
CTGAGGATGGGGCAGTTTCAGTTAATCAACTTTAACC
ATCCTCAGTG
TTAGATGAGACAAGAGTGAGT
GTTACATTAATACCAGGTATTGGGACACTCACTCTTATA
dot-bracket secondary structure
((((((((((((...((((((....(((..((.((.((((((
((((((..(((((((((((((
((((((((((...((((..........))))....))
))))))))))
)))))))))))..))))))))
)))).)).))..)))))))))..))))))))))))....
SIMILARITIES
miRBase
cin-mir-4186
:
0.0005
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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