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ABOUT THIS RECORD

ID: MNEST005621
species: Ciona intestinalis
miRNA family: miR-4216
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAATCTGGTAGAAGAGCTTA

miRNA*
AGCTCTTCCTCAAAATTTATT

mismatches: 3
bulges: 2

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pre-miRNA
AGGCATATTATAAATCTAACGAAGCTCTTCCTCAAAATTTATTAGTGCTGATATACTTCTTATCAAATAATATGTTGGTACAAAAAATAAATCTGGTAGA
AGAGCTTA
ATTAGATTTTGTTGTGACC


dot-bracket secondary structure
.((((((....((((((((..(((((((((.(((..(((((((.(((((((((((...............)))))))))))....))))))).)))..))
))))))).
.))))))))...)))).))



SIMILARITIES
miRBase cin-mir-4216: 4e-41

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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