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ABOUT THIS RECORD
ID:
MNEST005624
species:
Ciona intestinalis
miRNA family:
miR-4142
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGCAGCTCATCTGGTTTAAA
miRNA*
TATACCAGATGAGCTGCTACA
mismatches:
1
bulges:
0
View larger
pre-miRNA
GGCATTATGTAAATAATCTTT
TAGCAGCTCATCTGGTTTAAA
AATATCAGGAAAAGTATTCCCTTATTAAGTGTTGCCAGATGGCAGATAGAAGGTTGGA
AATTTACTAAGTTATT
TATACCAGATGAGCTGCTACA
ACACTATTTATATAATTA
dot-bracket secondary structure
...((((((((((((...((.
((((((((((((((((.((((
...((..((.(((...(((((((.(((....(((((....))))).))).)))..)))
).))).))..))..))
)).)))))))))))))))).)
)...))))))))))))..
SIMILARITIES
miRBase
cin-mir-4142
:
0.0001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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