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ABOUT THIS RECORD
ID:
MNEST005627
species:
Ciona intestinalis
miRNA family:
miR-4109
source:
miRNEST
Taxonomy by NCBI:
Ciona intestinalis
Ciona
Cionidae
Phlebobranchia
Enterogona
Ascidiacea
Tunicata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGGTCCAATTAAGCGGGGTT
miRNA*
CCCGGCTTAATCGGTTCAGTT
mismatches:
4
bulges:
0
View larger
pre-miRNA
NCTAAAAAGGTAATACTGTCAA
CCCGGCTTAATCGGTTCAGTT
TGGCTTGGTCCTGAT
GTGGTCCAATTAAGCGGGGTT
GACTGTATTACAAGTTCTG
dot-bracket secondary structure
.........(((((((.(((((
(((.(((((((.((.(((..(
(((.......)))).
.))).)).))))))).)))))
))).)))))))........
SIMILARITIES
miRBase
cin-mir-4109
:
0.00000008
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record