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ABOUT THIS RECORD

ID: MNEST005633
species: Ciona intestinalis
miRNA family: miR-4098
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCGAAACGTAACAGAGCGATT

miRNA*
CCGCTATGTTTCGCTTCGGTT

mismatches: 4
bulges: 0

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pre-miRNA
GTTTTTCAAATACAGACTACTAATCAACCATCCCTTTTTATAACCAATCAAACCGCTATGTTTCGCTTCGGTTAGTTAGGGGTTAAAGCGACTTGATTGG
TATATATTGCGTGGACGTGCGTCTTATAAAAATACGTTGTCACCGAAACGTAACAGAGCGATTTAATTGGTTAACAGCGGGGATGGATGCGTAATAGTTT
GTAGATATCTGT


dot-bracket secondary structure
..........(((((((((.((..((.((((((((.((..((((((((.(((.((((.((((.((.((((((((((((((...........))))))))(
((.....)))...(((..((((.((.....)).)))).))))))))).)).)))).)))).))).))))))))..)).)))))))).))..)).))))))
))).........



SIMILARITIES
miRBase cin-mir-4098: 0.00000004

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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