ABOUT THIS RECORDspecies: Ciona intestinalis
miRNA family: miR-4103
source: miRNEST
Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCGCTGCGGGTCCGCTGTCCG miRNA* GACCACGGGTCTGTGACGTAG mismatches: 4 bulges: 0 |
pre-miRNA
CCATGTAACGTTCGCCAACCACGTGCCTTTTAGACCACGGGTCTGTGACGTAGCAGCGCTGCGGGTCCGCTGTCCGAAAATCTGGCCATATGGTTACTGG
CTCGA
dot-bracket secondary structure
........((...((((((((.(((((((((.(((..((((((((((.(((....))).))))))))))..))).))))....)).))).))))...)))
).)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCATGTAACGTTCGCCAACCACGTGCCTTTTAGACCACGGGTCTGTGACGTAGCAGCGCTGCGGGTCCGCTGTCCGAAAATCTGGCCATATGGTTACTGG
CTCGA
dot-bracket secondary structure
........((...((((((((.(((((((((.(((..((((((((((.(((....))).))))))))))..))).))))....)).))).))))...)))
).)).
SIMILARITIES| miRBase cin-mir-4103: 4e-16 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: cin-mir-4103 from miRBase (MNEST025162) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
