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ABOUT THIS RECORD

ID: MNEST005638
species: Ciona intestinalis
miRNA family: miR-4206
source: miRNEST

Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATTGAATGGTTTAGTGAGGTC

miRNA*
TCTAACTTGATCATTTAGAGG

mismatches: 3
bulges: 0

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pre-miRNA
CGCTACTACCGATTGAATGGTTTAGTGAGGTCCTCCGATTGGACCCGGCGCGGTCGGCAACGGCCGCGCCGGCGTCCGAAAAGACGATCTAACTTGATCA
TTTAGAGG
AAGTAAAA


dot-bracket secondary structure
...((((.((..((((((((((.(((.(((((.((...((((((((((((((((((....)))))))))))).))))))...)).))))).))).)))))
))))).))
.))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 2e-43
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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