ABOUT THIS RECORDspecies: Ciona intestinalis
miRNA family: miR-4206
source: miRNEST
Taxonomy by NCBI:
Ciona intestinalis Ciona Cionidae Phlebobranchia Enterogona Ascidiacea Tunicata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTGAATGGTTTAGTGAGGTC miRNA* TCTAACTTGATCATTTAGAGG mismatches: 3 bulges: 0 |
pre-miRNA
CGCTACTACCGATTGAATGGTTTAGTGAGGTCCTCCGATTGGACCCGGCGCGGTCGGCAACGGCCGCGCCGGCGTCCGAAAAGACGATCTAACTTGATCA
TTTAGAGGAAGTAAAA
dot-bracket secondary structure
...((((.((..((((((((((.(((.(((((.((...((((((((((((((((((....)))))))))))).))))))...)).))))).))).)))))
))))).)).))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGCTACTACCGATTGAATGGTTTAGTGAGGTCCTCCGATTGGACCCGGCGCGGTCGGCAACGGCCGCGCCGGCGTCCGAAAAGACGATCTAACTTGATCA
TTTAGAGGAAGTAAAA
dot-bracket secondary structure
...((((.((..((((((((((.(((.(((((.((...((((((((((((((((((....)))))))))))).))))))...)).))))).))).)))))
))))).)).))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 2e-43 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
