ABOUT THIS RECORDspecies: Rattus norvegicus
miRNA family: miR-3473
source: miRNEST
Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAGATGGCTCAGCAGTT miRNA* CTGCCTTGCTGTCCCTTTTCT mismatches: 5 bulges: 0 |
pre-miRNA
TTGCTCACTGAGCTGCCTTGCTGTCCCTTTTCTGACAAACTCTATAGCTGGAGAGATGGCTCAGCAGTTAAGAGAGCT
dot-bracket secondary structure
..((((.((.((((((...((((((.((((.(((..........)))..)))).))))))...)))))).)).)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGCTCACTGAGCTGCCTTGCTGTCCCTTTTCTGACAAACTCTATAGCTGGAGAGATGGCTCAGCAGTTAAGAGAGCT
dot-bracket secondary structure
..((((.((.((((((...((((((.((((.(((..........)))..)))).))))))...)))))).)).)))).
SIMILARITIES| miRBase mmu-mir-3473: 0.000004 PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.000004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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