ABOUT THIS RECORD

ID: MNEST005670
species: Rattus norvegicus
miRNA family: miR-3195
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GCGCGGGAAATGTGGCGTACGGAAGACCCACTCCCCGGCGCCGCTCGTGGGGGGCCCACGTCCTTATGATCGAGGCCCAGCCCGTGGACGGTGTGAGGCC
GGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGACTCGGGTTGCTTGGG

dot-bracket secondary structure
((((..........))))..(((((((((....((((((((.(((....(((((((..((.(((((((.(((.(((...)))..)))....))))))).)
).....))))))))))))))))))...)))))))))....((((((...))))))


SIMILARITIES

miRBase mmu-mir-5105: 3e-30 PMRD no hits microPC no hits

UniProt no hits RFAM SSU_rRNA_eukarya: 8e-74

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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