ABOUT THIS RECORD

ID: MNEST005692
species: Rattus norvegicus
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CTGGCTTTTTTGATGTTGCTGCTGATGCTGGCCCTCTGTCTTTTCCACAGGTCACAGGAACATGATGTGGAGAGAAACCGAATCCGACAAGCCCGGCCTA
GACTCTTCTACGGCCGGCGTCTGCGTCTCCCAAGAGTCGTTCACCATCACCATCACCGTGGCCCACATGGGGTGACCAGTGTAGGCGTTCACCAGCACCA
TCATTCTCCCCA

dot-bracket secondary structure
.(((......(((((.(((((.(((.(((.((...(((((..(((((..((((((..((...((((((((.((((.........((.((.((((((((((
((....)))).)))))).)).))))))))))).((.....))..)))))...))...))))))....))))).)).))).)).)))..))).))))).))
)))......)))


SIMILARITIES

miRBase mml-mir-569: 0.0007 PMRD no hits microPC no hits

UniProt sp|Q9D6B9|HRCT1_MOUSE: 0.000000002 RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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