ABOUT THIS RECORD

ID: MNEST005693
species: Rattus norvegicus
miRNA family: mir-28
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GGTCCCTGCCCACGAGGAGCTCACAGTCTAGAGGGAGGCAACACAGTACACAGTGGGCTGCAGCTACACCTGCCAGAGTGGTTAGAGTCAGAAGCAAGAC
ACCAAGTGCTGTGGGGCCATGGAATAGCATAGGGCTGCTTCTGCTCACAACACAAAGAGACTCAGGGCTGGGCCCCTCGTGCC

dot-bracket secondary structure
(((....)))(((((((.(((..((((((.(((...(((..((((((((...(((.(((...(((......((((...))))...)))....)))....)
))...))))))))..)))..((((((((.....)))).)))).(((..........))).))).))))))))).)))))))..


SIMILARITIES

miRBase hsa-mir-151b: 0.000002 PMRD no hits microPC no hits

UniProt no hits RFAM mir-28: 0.000000003

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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