miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005695
species: Rattus norvegicus
miRNA family: miR-1808
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTTAGGAATGAATACATG

miRNA*
TGTAGTATTCCTGCTCACAAT

mismatches: 3
bulges: 2

View larger
pre-miRNA
TACAAGAGTGCCGCTTCCTTTTGTGTTAGGAATGAATACATGCTGTAAATATATATGTACATACCCACACACATATATTGAATGAATGGAGCCTTAAAGA
GCTAGGATGAGCCACCGGAAGTGTAGTATTCCTGCTCACAATGAATGCTGCAGCATTTGG


dot-bracket secondary structure
..((((.((((.(((((...(((((.((((((((..(((((.(((..(((((((.(((..........))).))))))).......(((..(((......
...))).....))).)))..))))).))))))))..))))).))).)).))).).)))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;