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ABOUT THIS RECORD

ID: MNEST005710
species: Rattus norvegicus
miRNA family: miR-709
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGGCAGAGGCAGGAGGA

miRNA*
TTCCTGCTACTGCTTTAAG

mismatches: 3
bulges: 0

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pre-miRNA
TATCAAAAAGCCCTTCCTGCTACTGCTTTAAGAACTGATTCCTGCTGGCTTGTGGTGGCTCACGCCTTTAATCCTAGCACTGGGAGGCAGAGGCAGGAGG
A
CCTCGGAGTT


dot-bracket secondary structure
............(((((((((.(((((((.((..........((((((.(((.((((.....))))..))).)).))))))..))))))).)))))))))
.
..........



SIMILARITIES
miRBase mmu-mir-709: 0.0003

PMRD ptc-miRf12412-akr: 0.0003

microPC no hits
UniProt no hits

RFAM Metazoa_SRP: 0.000000006
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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