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ABOUT THIS RECORD
ID:
MNEST005731
species:
Rattus norvegicus
miRNA family:
mir-1273
source:
miRNEST
Taxonomy by NCBI:
Rattus norvegicus
Rattus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGGGACAGAGCAAGACTCCG
miRNA*
GAGTCACGATCTGTCTCCCAG
mismatches:
4
bulges:
0
View larger
pre-miRNA
CTGTTTCCCCGGTTTTTTTTTTTTTGGAGATG
GAGTCACGATCTGTCTCCCAG
GTTGGAGT
GGGGGACAGAGCAAGACTCCG
TCTCAAAAAAAATAAAAA
AATAAAAATAA
dot-bracket secondary structure
...........((((((((.(((((.((((((
(((((....(((((((((((.
.......)
))))))))))....)))))))
))))...))))).)))))
)))........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Metazoa_SRP: 0.0004
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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