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ABOUT THIS RECORD

ID: MNEST005734
species: Rattus norvegicus
miRNA family: miR-124
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGTGTTCACAGCGGACCTTGA

miRNA*
AAGGCACGCGGTGAATGCC

mismatches: 4
bulges: 0

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pre-miRNA
CGTGTTCACAGCGGACCTTGATTTAAATGTCCATACAATTAAGGCACGCGGTGAATGCC

dot-bracket secondary structure
.((((((((.(((..((((((((.............))))))))..))).)))))))).


SIMILARITIES
miRBase tgu-mir-124-2: 8e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-124: 1e-26
most similar mature miRNAs

Identical with: eca-mir-124 from miRBase (MNEST027007)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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