ABOUT THIS RECORDspecies: Rattus norvegicus
miRNA family: mir-26
source: miRNEST
Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCAAGTAATTCAGGATAGGT miRNA* CTGTTCTCCATTACTTGGCT mismatches: 2 bulges: 1 |
pre-miRNA
CCCCCACTGCCCGGGACCCAGTTCAAGTAATTCAGGATAGGTTGTGGTGCTGGCCAGCCTGTTCTCCATTACTTGGCTCGGGGGCCGGTGCCCTGC
dot-bracket secondary structure
........((((((..((((((.((((((((..(((((((((..((((....)))))))))))))..))))))))))).)))..)))).)).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
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CCCCCACTGCCCGGGACCCAGTTCAAGTAATTCAGGATAGGTTGTGGTGCTGGCCAGCCTGTTCTCCATTACTTGGCTCGGGGGCCGGTGCCCTGC
dot-bracket secondary structure
........((((((..((((((.((((((((..(((((((((..((((....)))))))))))))..))))))))))).)))..)))).)).....
SIMILARITIES| miRBase rno-mir-26b: 5e-43 PMRD no hits microPC no hits | UniProt no hits RFAM mir-26: 7e-27 | most similar mature miRNAs |
Identical with: rno-mir-26b from miRBase (MNEST032679) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
additional data
download this record
