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ABOUT THIS RECORD

ID: MNEST005745
species: Rattus norvegicus
miRNA family: mir-126
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGTACCGTGAGTAATAATGCG

miRNA*
CATTATTACTTTTGGTACGCG

mismatches: 2
bulges: 0

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pre-miRNA
TGTCTTTGCCGGTGACAGCACATTATTACTTTTGGTACGCGCTGTGACACTTCAAACTCGTACCGTGAGTAATAATGCGTGGTCAACAGCGCAGCA

dot-bracket secondary structure
((.((.(((...((((.((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).)).))))...))).))))


SIMILARITIES
miRBase rno-mir-3567: 1e-49

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-126: 4e-28
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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