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ABOUT THIS RECORD

ID: MNEST005747
species: Rattus norvegicus
miRNA family: miR-24
source: miRNEST

Taxonomy by NCBI:
Rattus norvegicus Rattus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCTACTGAGCTGATATCAG

miRNA*
GGCTCAGTTCAGCAGGAACA

mismatches: 3
bulges: 1

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pre-miRNA
CCCGCCCTCCGGTGCCTACTGAGCTGATATCAGTTCTCATTTCACACACTGGCTCAGTTCAGCAGGAACAGGAGTCGAG

dot-bracket secondary structure
..((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).))..


SIMILARITIES
miRBase mmu-mir-3074-1: 1e-39

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-24: 1e-24
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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